BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E04SP1|AL428914
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig419 1233 0.0
>3x_Contig419
Length = 1943
Score = 1233 bits (622), Expect = 0.0
Identities = 653/660 (98%), Gaps = 3/660 (0%)
Strand = Plus / Plus
Query: 1 ccatctggtacccccgactcgggaagtatcggattgcgaaacatagctgtttagttcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 ccatctggtacccccgactcgggaagtatcggattgcgaaacatagctgtttagttcatc 1345
Query: 61 gaactcgccaggttccaattgagtttcttgaacaatggagtaatccaattttttctcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 gaactcgccaggttccaattgagtttcttgaacaatggagtaatccaattttttctcttc 1405
Query: 121 agtcatgatagaaattacttacttcgttattgcttggagcctgatagtaggccgactatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 agtcatgatagaaattacttacttcgttattgcttggagcctgatagtaggccgactatc 1465
Query: 181 aacaatattgcacctactttctaggtcagctattcgaaaatcaatgaataatcacccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 aacaatattgcacctactttctaggtcagctattcgaaaatcaatgaataatcacccctt 1525
Query: 241 atatataagattccaataaagggggctccaaaaagatctcaatatgtatctgatctaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 atatataagattccaataaagggggctccaaaaagatctcaatatgtatctgatctaaag 1585
Query: 301 atcagacactatcagttaacaactaatcaatgcaaaagtcaagaccgcccagaattcgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 atcagacactatcagttaacaactaatcaatgcaaaagtcaagaccgcccagaattcgtt 1645
Query: 361 ctccctatcaactctggagtgaaacgaanctattctacggcatattgtgttgcaaaacgg 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1646 ctccctatcaactctggagtgaaacgaa-ctattctacggcatattgtgttgcaaaacgg 1704
Query: 421 tcattccagtgagctgaaactgacccttcatccagtggactggaccaccatgaacactga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 tcattccagtgagctgaaactgacccttcatccagtggactggaccaccatgaacactga 1764
Query: 481 acctagccttaaacttaaatcaaaggcattatgtcactcattttagccgatagacatcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 acctagccttaaacttaaatcaaaggcattatgtcactcattttagccgatagacatcta 1824
Query: 541 aggtttaatttcatttcaataattgtggccgttccttaggttttttgcagccgttttctg 600
|||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||
Sbjct: 1825 aggtttaatttcatttcaataattgtggccgttccttaggttttntgcagcccgtntctg 1884
Query: 601 tgcctgtctactgattcattccttagattacgaag-aacagataacatgcagataccata 659
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1885 tgcctgtctactgattcattccttagattacgaagaaacagat-acatgcagataccata 1943
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6363
Number of Sequences: 1807
Number of extensions: 6363
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)